| Name : R-geneset
| |
| Version : 0.2.7
| Vendor : obs://build_opensuse_org/devel:languages:R
|
| Release : lp153.4.2
| Date : 2024-06-14 11:53:31
|
| Group : Development/Libraries/Other
| Source RPM : R-geneset-0.2.7-lp153.4.2.src.rpm
|
| Size : 0.36 MB
| |
| Packager : (none)
| |
| Summary : Get Gene Sets for Gene Enrichment Analysis
|
Description :
Gene sets are fundamental for gene enrichment analysis. The package
\'geneset\' enables querying gene sets from public databases including
\'GO\' (Gene Ontology Consortium. (2004) < doi:10.1093/nar/gkh036>),
\'KEGG\' (Minoru et al. (2000) < doi:10.1093/nar/28.1.27>), \'WikiPathway\'
(Marvin et al. (2020) < doi:10.1093/nar/gkaa1024>), \'MsigDb\' (Arthur et
al. (2015) < doi:10.1016/j.cels.2015.12.004>), \'Reactome\' (David et al.
(2011) < doi:10.1093/nar/gkq1018>), \'MeSH\' (Ish et al. (2014)
< doi:10.4103/0019-5413.139827>), \'DisGeNET\' (Janet et al. (2017)
< doi:10.1093/nar/gkw943>), \'Disease Ontology\' (Lynn et al. (2011)
< doi:10.1093/nar/gkr972>), \'Network of Cancer Genes\' (Dimitra et al.
(2019) < doi:10.1186/s13059-018-1612-0>) and \'COVID-19\' (Maxim et al.
(2020) < doi:10.21203/rs.3.rs-28582/v1>). Gene sets are stored in the
list object which provides data frame of \'geneset\' and \'geneset_name\'.
The \'geneset\' has two columns of term ID and gene ID. The
\'geneset_name\' has two columns of terms ID and term description.
|
RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Leap_15.3/x86_64 |
