| Name : R-manhattanly
| |
| Version : 0.3.0
| Vendor : obs://build_opensuse_org/devel:languages:R
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| Release : lp153.22.2
| Date : 2024-06-14 12:04:49
|
| Group : Development/Libraries/Other
| Source RPM : R-manhattanly-0.3.0-lp153.22.2.src.rpm
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| Size : 0.48 MB
| |
| Packager : (none)
| |
| Summary : Interactive Q-Q and Manhattan Plots Using \'plotly.js\'
|
Description :
Create interactive manhattan, Q-Q and volcano plots that are usable
from the R console, in \'Dash\' apps, in the \'RStudio\' viewer pane, in \'R
Markdown\' documents, and in \'Shiny\' apps. Hover the mouse pointer over
a point to show details or drag a rectangle to zoom. A manhattan plot
is a popular graphical method for visualizing results from
high-dimensional data analysis such as a (epi)genome wide association
study (GWAS or EWAS), in which p-values, Z-scores, test statistics are
plotted on a scatter plot against their genomic position. Manhattan
plots are used for visualizing potential regions of interest in the
genome that are associated with a phenotype. Interactive manhattan
plots allow the inspection of specific value (e.g. rs number or gene
name) by hovering the mouse over a cell, as well as zooming into a
region of the genome (e.g. a chromosome) by dragging a rectangle around
the relevant area. This work is based on the \'qqman\' package and the
\'plotly.js\' engine. It produces similar manhattan and Q-Q plots as the
\'manhattan\' and \'qq\' functions in the \'qqman\' package, with the
advantage of including extra annotation information and interactive
web-based visualizations directly from R. Once uploaded to a \'plotly\'
account, \'plotly\' graphs (and the data behind them) can be viewed and
modified in a web browser.
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RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Leap_15.3/x86_64 |
