| Name : R-metamicrobiomeR
| |
| Version : 1.2
| Vendor : obs://build_opensuse_org/devel:languages:R
|
| Release : lp153.24.1
| Date : 2024-06-21 11:30:33
|
| Group : Development/Libraries/Other
| Source RPM : R-metamicrobiomeR-1.2-lp153.24.1.src.rpm
|
| Size : 1.40 MB
| |
| Packager : (none)
| |
| Summary : Microbiome Data Analysis & Meta-Analysis with GAMLSS-BEZI & Random Effects
|
Description :
Generalized Additive Model for Location, Scale and Shape (GAMLSS) with
zero inflated beta (BEZI) family for analysis of microbiome relative
abundance data (with various options for data
transformation/normalization to address compositional effects) and
random effects meta-analysis models for meta-analysis pooling estimates
across microbiome studies are implemented. Random Forest model to
predict microbiome age based on relative abundances of shared bacterial
genera with the Bangladesh data (Subramanian et al 2014), comparison of
multiple diversity indexes using linear/linear mixed effect models and
some data display/visualization are also implemented. The reference
paper is published by Ho NT, Li F, Wang S, Kuhn L (2019)
< doi:10.1186/s12859-019-2744-2> .
|
RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Leap_15.3/x86_64 |
