| Name : R-photosynthesis
| |
| Version : 2.1.4
| Vendor : obs://build_opensuse_org/devel:languages:R
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| Release : lp153.2.2
| Date : 2024-06-14 12:00:40
|
| Group : Development/Libraries/Other
| Source RPM : R-photosynthesis-2.1.4-lp153.2.2.src.rpm
|
| Size : 7.04 MB
| |
| Packager : (none)
| |
| Summary : Tools for Plant Ecophysiology & Modeling
|
Description :
Contains modeling and analytical tools for plant ecophysiology.
MODELING: Simulate C3 photosynthesis using the Farquhar, von Caemmerer,
Berry (1980) < doi:10.1007/BF00386231> model as described in Buckley and
Diaz-Espejo (2015) < doi:10.1111/pce.12459>. It uses units to ensure
that parameters are properly specified and transformed before
calculations. Temperature response functions get automatically \"baked\"
into all parameters based on leaf temperature following Bernacchi et
al. (2002) < doi:10.1104/pp.008250>. The package includes boundary
layer, cuticular, stomatal, and mesophyll conductances to CO2, which
each can vary on the upper and lower portions of the leaf. Use
straightforward functions to simulate photosynthesis over environmental
gradients such as Photosynthetic Photon Flux Density (PPFD) and leaf
temperature, or over trait gradients such as CO2 conductance or
photochemistry. ANALYTICAL TOOLS: Fit ACi (Farquhar et al. (1980)
< doi:10.1007/BF00386231>) and AQ curves (Marshall & Biscoe (1980)
< doi:10.1093/jxb/31.1.29>), temperature responses (Heskel et al. (2016)
< doi:10.1073/pnas.1520282113> Kruse et al. (2008)
< doi:10.1111/j.1365-3040.2008.01809.x>, Medlyn et al. (2002)
< doi:10.1046/j.1365-3040.2002.00891.x>, Hobbs et al. (2013)
< doi:10.1021/cb4005029>), respiration in the light (Kok (1956)
< doi:10.1016/0006-3002(56)90003-8>, Walker & Ort (2015)
< doi:10.1111/pce.12562>, Yin et al. (2009)
< doi:10.1111/j.1365-3040.2009.01934.x>, Yin et al. (2011)
< doi:10.1093/jxb/err038>), mesophyll conductance (Harley et al. (1992)
< doi:10.1104/pp.98.4.1429>), pressure-volume curves (Koide et al.
(2000) < doi:10.1007/978-94-009-2221-1_9>, Sack et al. (2003)
< doi:10.1046/j.0016-8025.2003.01058.x>, Tyree et al. (1972)
< doi:10.1093/jxb/23.1.267>), hydraulic vulnerability curves (Ogle et
al. (2009) < doi:10.1111/j.1469-8137.2008.02760.x>, Pammenter et al.
(1998) < doi:10.1093/treephys/18.8-9.589>), and tools for running
sensitivity analyses particularly for variables with uncertainty (e.g.
g_mc(), gamma_star(), R_d()).
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RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Leap_15.3/x86_64 |
