| Name : R-pould
| |
| Version : 1.0.1
| Vendor : obs://build_opensuse_org/devel:languages:R
|
| Release : lp153.34.3
| Date : 2024-06-14 12:14:01
|
| Group : Development/Libraries/Other
| Source RPM : R-pould-1.0.1-lp153.34.3.src.rpm
|
| Size : 0.16 MB
| |
| Packager : (none)
| |
| Summary : Phased or Unphased Linkage Disequilibrium
|
Description :
Computes the D\', Wn, and conditional asymmetric linkage disequilibrium
(ALD) measures for pairs of genetic loci. Performs these linkage
disequilibrium (LD) calculations on phased genotype data recorded using
Genotype List (GL) String or columnar formats. Alternatively, generates
expectation-maximization (EM) estimated haplotypes from phased data, or
performs LD calculations on EM estimated haplotypes. Performs sign
tests comparing LD values for phased and unphased datasets, and
generates heat-maps for each LD measure. Described by Osoegawa et al.
(2019a) < doi:10.1016/j.humimm.2019.01.010>, and Osoegawa et. al.
(2019b) < doi:10.1016/j.humimm.2019.05.018>.
|
RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Leap_15.3/x86_64 |
