| Name : R-simtrait
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| Version : 1.1.3
| Vendor : obs://build_opensuse_org/devel:languages:R
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| Release : lp153.1.7
| Date : 2024-06-14 11:31:24
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| Group : Development/Libraries/Other
| Source RPM : R-simtrait-1.1.3-lp153.1.7.src.rpm
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| Size : 0.54 MB
| |
| Packager : (none)
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| Summary : Simulate Complex Traits from Genotypes
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Description :
Simulate complex traits given a SNP genotype matrix and model
parameters (the desired heritability, number of causal loci, and either
the true ancestral allele frequencies used to generate the genotypes or
the mean kinship for a real dataset). Emphasis on avoiding common
biases due to the use of estimated allele frequencies. The code
selects random loci to be causal, constructs coefficients for these
loci and random independent non-genetic effects, and can optionally
generate random group effects. Traits can follow three models: random
coefficients, fixed effect sizes, and infinitesimal (multivariate
normal). GWAS method benchmarking functions are also provided.
Described in Yao and Ochoa (2022) < doi:10.1101/2022.03.25.485885>.
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RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Leap_15.3/x86_64 |
