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R-stmgp rpm build for : openSUSE Leap 15. For other distributions click R-stmgp.

Name : R-stmgp
Version : 1.0.4 Vendor : obs://build_opensuse_org/devel:languages:R
Release : lp153.1.12 Date : 2024-06-14 11:13:13
Group : Development/Libraries/Other Source RPM : R-stmgp-1.0.4-lp153.1.12.src.rpm
Size : 1.59 MB
Packager : (none)
Summary : Rapid and Accurate Genetic Prediction Modeling for Genome-Wide Association or Whole-Genome Sequencing Study Data
Description :
Rapidly build accurate genetic prediction models for genome-wide
association or whole-genome sequencing study data by smooth-threshold
multivariate genetic prediction (STMGP) method. Variable selection is
performed using marginal association test p-values with an optimal
p-value cutoff selected by Cp-type criterion. Quantitative and binary
traits are modeled respectively via linear and logistic regression
models. A function that works through PLINK software (Purcell et al.
2007 < DOI:10.1086/519795>, Chang et al. 2015
< DOI:10.1186/s13742-015-0047-8>) < https://www.cog-genomics.org/plink2>
is provided. Covariates can be included in regression model.

RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Leap_15.3/x86_64

Content of RPM  Provides Requires

Download
ftp.icm.edu.pl  R-stmgp-1.0.4-lp153.1.12.x86_64.rpm
     

Provides :
R-stmgp
R-stmgp(x86-64)

Requires :
R-base
rpmlib(CompressedFileNames) <= 3.0.4-1
rpmlib(FileDigests) <= 4.6.0-1
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
rpmlib(PayloadIsXz) <= 5.2-1


Content of RPM :
/usr/lib64/R/library/stmgp
/usr/lib64/R/library/stmgp/DESCRIPTION
/usr/lib64/R/library/stmgp/INDEX
/usr/lib64/R/library/stmgp/Meta
/usr/lib64/R/library/stmgp/Meta/Rd.rds
/usr/lib64/R/library/stmgp/Meta/features.rds
/usr/lib64/R/library/stmgp/Meta/hsearch.rds
/usr/lib64/R/library/stmgp/Meta/links.rds
/usr/lib64/R/library/stmgp/Meta/nsInfo.rds
/usr/lib64/R/library/stmgp/Meta/package.rds
/usr/lib64/R/library/stmgp/NAMESPACE
/usr/lib64/R/library/stmgp/NEWS.md
/usr/lib64/R/library/stmgp/R
/usr/lib64/R/library/stmgp/R/stmgp
/usr/lib64/R/library/stmgp/R/stmgp.rdb
/usr/lib64/R/library/stmgp/R/stmgp.rdx
/usr/lib64/R/library/stmgp/extdata
/usr/lib64/R/library/stmgp/extdata/causal.txt
/usr/lib64/R/library/stmgp/extdata/pSum.txt
/usr/lib64/R/library/stmgp/extdata/snps.raw.zip
/usr/lib64/R/library/stmgp/extdata/test.bed
/usr/lib64/R/library/stmgp/extdata/test.bim
/usr/lib64/R/library/stmgp/extdata/test.cov
/usr/lib64/R/library/stmgp/extdata/test.fam
/usr/lib64/R/library/stmgp/extdata/test.log
/usr/lib64/R/library/stmgp/extdata/test.raw
/usr/lib64/R/library/stmgp/extdata/testb.fam
/usr/lib64/R/library/stmgp/extdata/train.bed
/usr/lib64/R/library/stmgp/extdata/train.bim
/usr/lib64/R/library/stmgp/extdata/train.cov
There is 14 files more in these RPM.

 
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