SEARCH
NEW RPMS
DIRECTORIES
ABOUT
FAQ
VARIOUS
BLOG

 
 

R-sumFREGAT rpm build for : openSUSE Leap 15. For other distributions click R-sumFREGAT.

Name : R-sumFREGAT
Version : 1.2.5 Vendor : obs://build_opensuse_org/devel:languages:R
Release : lp153.2.7 Date : 2024-06-14 11:56:52
Group : Development/Libraries/Other Source RPM : R-sumFREGAT-1.2.5-lp153.2.7.src.rpm
Size : 2.78 MB
Packager : (none)
Summary : Fast Region-Based Association Tests on Summary Statistics
Description :
An adaptation of classical region/gene-based association analysis
techniques to the use of summary statistics (P values and effect sizes)
and correlations between genetic variants as input. It is a tool to
perform the most popular and efficient gene-based tests using the
results of genome-wide association (meta-)analyses without having the
original genotypes and phenotypes at hand. See for details: Svishcheva
et al (2019) Gene-based association tests using GWAS summary
statistics. Bioinformatics. Belonogova et al (2022) SumSTAAR: A
flexible framework for gene-based association studies using GWAS
summary statistics. PLOS Comp Biol.

RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Leap_15.3/x86_64

Content of RPM  Provides Requires

Download
ftp.icm.edu.pl  R-sumFREGAT-1.2.5-lp153.2.7.x86_64.rpm
     

Provides :
R-sumFREGAT
R-sumFREGAT(x86-64)

Requires :
R-BH
R-GBJ
R-RSpectra
R-Rcpp
R-RcppEigen
R-SKAT
R-SPAtest
R-base
R-mvtnorm
R-seqminer
libR.so()(64bit)
libc.so.6()(64bit)
libc.so.6(GLIBC_2.11)(64bit)
libc.so.6(GLIBC_2.2.5)(64bit)
libc.so.6(GLIBC_2.4)(64bit)
libm.so.6()(64bit)
libm.so.6(GLIBC_2.2.5)(64bit)
libm.so.6(GLIBC_2.29)(64bit)
libstdc++.so.6()(64bit)
libstdc++.so.6(CXXABI_1.3.8)(64bit)
libstdc++.so.6(GLIBCXX_3.4)(64bit)
rpmlib(CompressedFileNames) <= 3.0.4-1
rpmlib(FileDigests) <= 4.6.0-1
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
rpmlib(PayloadIsXz) <= 5.2-1


Content of RPM :
/usr/lib64/R/library/sumFREGAT
/usr/lib64/R/library/sumFREGAT/DESCRIPTION
/usr/lib64/R/library/sumFREGAT/INDEX
/usr/lib64/R/library/sumFREGAT/Meta
/usr/lib64/R/library/sumFREGAT/Meta/Rd.rds
/usr/lib64/R/library/sumFREGAT/Meta/features.rds
/usr/lib64/R/library/sumFREGAT/Meta/hsearch.rds
/usr/lib64/R/library/sumFREGAT/Meta/links.rds
/usr/lib64/R/library/sumFREGAT/Meta/nsInfo.rds
/usr/lib64/R/library/sumFREGAT/Meta/package.rds
/usr/lib64/R/library/sumFREGAT/NAMESPACE
/usr/lib64/R/library/sumFREGAT/R
/usr/lib64/R/library/sumFREGAT/R/sumFREGAT
/usr/lib64/R/library/sumFREGAT/R/sumFREGAT.rdb
/usr/lib64/R/library/sumFREGAT/R/sumFREGAT.rdx
/usr/lib64/R/library/sumFREGAT/help
/usr/lib64/R/library/sumFREGAT/help/AnIndex
/usr/lib64/R/library/sumFREGAT/help/aliases.rds
/usr/lib64/R/library/sumFREGAT/help/paths.rds
/usr/lib64/R/library/sumFREGAT/help/sumFREGAT.rdb
/usr/lib64/R/library/sumFREGAT/help/sumFREGAT.rdx
/usr/lib64/R/library/sumFREGAT/html
/usr/lib64/R/library/sumFREGAT/html/00Index.html
/usr/lib64/R/library/sumFREGAT/html/R.css
/usr/lib64/R/library/sumFREGAT/libs
/usr/lib64/R/library/sumFREGAT/libs/sumFREGAT.so
/usr/lib64/R/library/sumFREGAT/testfiles
/usr/lib64/R/library/sumFREGAT/testfiles/CFH.RData
/usr/lib64/R/library/sumFREGAT/testfiles/CFH.cor
/usr/lib64/R/library/sumFREGAT/testfiles/CFH.dat
There is 13 files more in these RPM.

 
ICM