| Name : R-tempoR
| |
| Version : 1.0.4.4
| Vendor : obs://build_opensuse_org/devel:languages:R
|
| Release : lp153.2.13
| Date : 2024-06-14 11:39:40
|
| Group : Development/Libraries/Other
| Source RPM : R-tempoR-1.0.4.4-lp153.2.13.src.rpm
|
| Size : 1.63 MB
| |
| Packager : (none)
| |
| Summary : Characterizing Temporal Dysregulation
|
Description :
TEMPO (TEmporal Modeling of Pathway Outliers) is a pathway-based
outlier detection approach for finding pathways showing significant
changes in temporal expression patterns across conditions. Given a
gene expression data set where each sample is characterized by an age
or time point as well as a phenotype (e.g. control or disease), and a
collection of gene sets or pathways, TEMPO ranks each pathway by a
score that characterizes how well a partial least squares regression
(PLSR) model can predict age as a function of gene expression in the
controls and how poorly that same model performs in the disease. TEMPO
v1.0.3 is described in Pietras (2018) < doi:10.1145/3233547.3233559>.
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RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Leap_15.3/x86_64 |
