| Name : R-OptM
| |
| Version : 0.1.3
| Vendor : obs://build_opensuse_org/devel:languages:R
|
| Release : 2.10
| Date : 2021-09-08 12:29:16
|
| Group : Development/Libraries/Other
| Source RPM : R-OptM-0.1.3-2.10.src.rpm
|
| Size : 0.34 MB
| |
| Packager : (none)
| |
| Summary : Estimating the Optimal Number of Migration Edges from \'Treemix\'
|
Description :
The popular population genetic software \'Treemix\' by \'Pickrell and
Pritchard\' (2012) < DOI:10.1371/journal.pgen.1002967> estimates the
number of migration edges on a population tree. However, it can be
difficult to determine the number of migration edges to include.
Previously, it was customary to stop adding migration edges when 99.8%
of variation in the data was explained, but \'OptM\' automates this
process using an ad hoc statistic based on the second-order rate of
change in the log likelihood. \'OptM\' also has added functionality for
various threshold modeling to compare with the ad hoc statistic.
|
RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/x86_64 |
