| Name : R-hibayes
| |
| Version : 3.0.3
| Vendor : obs://build_opensuse_org/devel:languages:R
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| Release : lp154.1.5
| Date : 2024-09-12 11:03:59
|
| Group : Development/Libraries/Other
| Source RPM : R-hibayes-3.0.3-lp154.1.5.src.rpm
|
| Size : 1.42 MB
| |
| Packager : https://www_suse_com/
| |
| Summary : Individual-Level, Summary-Level and Single-Step Bayesian Regression Model
|
Description :
A user-friendly tool to fit Bayesian regression models. It can fit 3
types of Bayesian models using individual-level, summary-level, and
individual plus pedigree-level (single-step) data for both Genomic
prediction/selection (GS) and Genome-Wide Association Study (GWAS), it
was designed to estimate joint effects and genetic parameters for a
complex trait, including: (1) fixed effects and coefficients of
covariates, (2) environmental random effects, and its corresponding
variance, (3) genetic variance, (4) residual variance, (5)
heritability, (6) genomic estimated breeding values (GEBV) for both
genotyped and non-genotyped individuals, (7) SNP effect size, (8)
phenotype/genetic variance explained (PVE) for single or multiple SNPs,
(9) posterior probability of association of the genomic window (WPPA),
(10) posterior inclusive probability (PIP). The functions are not
limited, we will keep on going in enriching it with more features.
References: Meuwissen et al. (2001) < doi:10.1093/genetics/157.4.1819>
Gustavo et al. (2013) < doi:10.1534/genetics.112.143313> Habier et al.
(2011) < doi:10.1186/1471-2105-12-186> Yi et al. (2008)
< doi:10.1534/genetics.107.085589> Zhou et al. (2013)
< doi:10.1371/journal.pgen.1003264> Moser et al. (2015)
< doi:10.1371/journal.pgen.1004969> Lloyd-Jones et al. (2019)
< doi:10.1038/s41467-019-12653-0> Henderson (1976)
< doi:10.2307/2529339> Fernando et al. (2014)
< doi:10.1186/1297-9686-46-50>.
|
RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/devel:/languages:/R:/autoCRAN/15.4/x86_64 |
