| Name : R-liger
| |
| Version : 2.0.1
| Vendor : obs://build_opensuse_org/devel:languages:R
|
| Release : lp154.2.7
| Date : 2024-09-12 11:02:59
|
| Group : Development/Libraries/Other
| Source RPM : R-liger-2.0.1-lp154.2.7.src.rpm
|
| Size : 5.56 MB
| |
| Packager : https://www_suse_com/
| |
| Summary : Lightweight Iterative Geneset Enrichment
|
Description :
Gene Set Enrichment Analysis (GSEA) is a computational method that
determines whether an a priori defined set of genes shows statistically
significant, concordant differences between two biological states. The
original algorithm is detailed in Subramanian et al. with \'Java\'
implementations available through the Broad Institute (Subramanian et
al. 2005 < doi:10.1073/pnas.0506580102>). The \'liger\' package provides a
lightweight R implementation of this enrichment test on a list of
values (Fan et al., 2017 < doi:10.5281/zenodo.887386>). Given a list of
values, such as p-values or log-fold changes derived from differential
expression analysis or other analyses comparing biological states, this
package enables you to test a priori defined set of genes for
enrichment to enable interpretability of highly significant or high
fold-change genes.
|
RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/devel:/languages:/R:/autoCRAN/15.4/x86_64 |
