| Name : R-STREAK
| |
| Version : 1.0.0
| Vendor : obs://build_opensuse_org/devel:languages:R
|
| Release : lp153.8.1
| Date : 2024-09-18 19:16:17
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| Group : Development/Libraries/Other
| Source RPM : R-STREAK-1.0.0-lp153.8.1.src.rpm
|
| Size : 3.02 MB
| |
| Packager : (none)
| |
| Summary : Receptor Abundance Estimation using Feature Selection and Gene Set Scoring
|
Description :
Performs receptor abundance estimation for single cell RNA-sequencing
data using a supervised feature selection mechanism and a thresholded
gene set scoring procedure. Seurat\'s normalization method is described
in: Hao et al., (2021) < doi:10.1016/j.cell.2021.04.048>, Stuart et al.,
(2019) < doi:10.1016/j.cell.2019.05.031>, Butler et al., (2018)
< doi:10.1038/nbt.4096> and Satija et al., (2015)
< doi:10.1038/nbt.3192>. Method for reduced rank reconstruction and
rank-k selection is detailed in: Javaid et al., (2022)
< doi:10.1101/2022.10.08.511197>. Gene set scoring procedure is
described in: Frost et al., (2020) < doi:10.1093/nar/gkaa582>.
Clustering method is outlined in: Song et al., (2020)
< doi:10.1093/bioinformatics/btaa613> and Wang et al., (2011)
< doi:10.32614/RJ-2011-015>.
|
RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Leap_15.3/x86_64 |
