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bedtools rpm build for : openSUSE Tumbleweed. For other distributions click bedtools.

Name : bedtools
Version : 2.31.1 Vendor : obs://build_opensuse_org/science
Release : 1.33 Date : 2024-01-05 19:30:02
Group : Productivity/Scientific/Other Source RPM : bedtools-2.31.1-1.33.src.rpm
Size : 2.13 MB
Packager : (none)
Summary : A powerful toolset for genome arithmetic
Description :
Collectively, the bedtools utilities are a swiss-army knife of tools for
a wide-range of genomics analysis tasks. The most widely-used tools enable
genome arithmetic: that is, set theory on the genome. For example, bedtools
allows one to intersect, merge, count, complement, and shuffle genomic
intervals from multiple files in widely-used genomic file formats such as
BAM, BED, GFF/GTF, VCF.

While each individual tool is designed to do a relatively simple task (e.g.,
intersect two interval files), quite sophisticated analyses can be
conducted by combining multiple bedtools operations on the UNIX command line.

RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/science/openSUSE_Tumbleweed/i586

Content of RPM  Changelog  Provides Requires

Download
ftp.icm.edu.pl  bedtools-2.31.1-1.33.i586.rpm
     Search for other platforms
bedtools-2.31.1-1.33.sparc.rpm
bedtools-2.31.1-1.33.alpha.rpm
bedtools-2.31.1-1.33.ppc.rpm
bedtools-2.31.1-1.33.ia64.rpm
bedtools-2.31.1-1.33.s390.rpm

Provides :
bedtools
bedtools(x86-32)

Requires :
/bin/sh
libbz2.so.1
libc.so.6
libc.so.6(GLIBC_2.0)
libc.so.6(GLIBC_2.1)
libc.so.6(GLIBC_2.1.3)
libc.so.6(GLIBC_2.3)
libc.so.6(GLIBC_2.3.2)
libc.so.6(GLIBC_2.33)
libc.so.6(GLIBC_2.34)
libc.so.6(GLIBC_2.38)
libc.so.6(GLIBC_2.7)
libgcc_s.so.1
libgcc_s.so.1(GCC_3.0)
libgcc_s.so.1(GCC_7.0.0)
libgcc_s.so.1(GLIBC_2.0)
liblzma.so.5
liblzma.so.5(XZ_5.0)
libm.so.6
libm.so.6(GLIBC_2.0)
libm.so.6(GLIBC_2.23)
libm.so.6(GLIBC_2.29)
libstdc++.so.6
libstdc++.so.6(CXXABI_1.3)
libstdc++.so.6(CXXABI_1.3.8)
libstdc++.so.6(GLIBCXX_3.4)
libstdc++.so.6(GLIBCXX_3.4.11)
libstdc++.so.6(GLIBCXX_3.4.15)
libstdc++.so.6(GLIBCXX_3.4.20)
libstdc++.so.6(GLIBCXX_3.4.21)
libstdc++.so.6(GLIBCXX_3.4.29)
libstdc++.so.6(GLIBCXX_3.4.32)
libstdc++.so.6(GLIBCXX_3.4.9)
libz.so.1
rpmlib(CompressedFileNames) <= 3.0.4-1
rpmlib(FileDigests) <= 4.6.0-1
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
rpmlib(PayloadIsZstd) <= 5.4.18-1


Content of RPM :
/usr/bin/annotateBed
/usr/bin/bamToBed
/usr/bin/bamToFastq
/usr/bin/bed12ToBed6
/usr/bin/bedToBam
/usr/bin/bedToIgv
/usr/bin/bedpeToBam
/usr/bin/bedtools
/usr/bin/closestBed
/usr/bin/clusterBed
/usr/bin/complementBed
/usr/bin/coverageBed
/usr/bin/expandCols
/usr/bin/fastaFromBed
/usr/bin/flankBed
/usr/bin/genomeCoverageBed
/usr/bin/getOverlap
/usr/bin/groupBy
/usr/bin/intersectBed
/usr/bin/linksBed
/usr/bin/mapBed
/usr/bin/maskFastaFromBed
/usr/bin/mergeBed
/usr/bin/multiBamCov
/usr/bin/multiIntersectBed
/usr/bin/nucBed
/usr/bin/pairToBed
/usr/bin/pairToPair
/usr/bin/randomBed
/usr/bin/shiftBed
There is 12 files more in these RPM.

 
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