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mmseq rpm build for : Fedora 40. For other distributions click mmseq.

Name : mmseq
Version : 1.0.11 Vendor : Fedora Project
Release : 19.fc40 Date : 2024-01-25 08:49:50
Group : Unspecified Source RPM : mmseq-1.0.11-19.fc40.src.rpm
Size : 1.79 MB
Packager : Fedora Project
Summary : Haplotype and isoform specific expression estimation for RNA-seq
Description :
Software for fast, scalable haplotype and isoform expression
estimation using multi-mapping RNA-seq reads. Example scripts are included.

RPM found in directory: /vol/rzm3/linux-fedora-buffet/fedora/linux/releases/40/Everything/x86_64/os/Packages/m

Content of RPM  Changelog  Provides Requires

Download
ftp.icm.edu.pl  mmseq-1.0.11-19.fc40.x86_64.rpm
     

Provides :
mmseq
mmseq(x86-64)

Requires :
/usr/bin/bash
/usr/bin/perl
/usr/bin/ruby
/usr/bin/sh
libboost_iostreams.so.1.83.0()(64bit)
libboost_regex.so.1.83.0()(64bit)
libc.so.6()(64bit)
libc.so.6(GLIBC_2.14)(64bit)
libc.so.6(GLIBC_2.2.5)(64bit)
libc.so.6(GLIBC_2.3)(64bit)
libc.so.6(GLIBC_2.3.4)(64bit)
libc.so.6(GLIBC_2.32)(64bit)
libc.so.6(GLIBC_2.33)(64bit)
libc.so.6(GLIBC_2.34)(64bit)
libc.so.6(GLIBC_2.38)(64bit)
libc.so.6(GLIBC_2.4)(64bit)
libflexiblas.so.3()(64bit)
libgcc_s.so.1()(64bit)
libgcc_s.so.1(GCC_3.0)(64bit)
libgcc_s.so.1(GCC_3.3.1)(64bit)
libgomp.so.1()(64bit)
libgomp.so.1(GOMP_1.0)(64bit)
libgomp.so.1(GOMP_4.0)(64bit)
libgomp.so.1(OMP_1.0)(64bit)
libgsl.so.27()(64bit)
libgslcblas.so.0()(64bit)
libhts.so.3()(64bit)
libm.so.6()(64bit)
libm.so.6(GLIBC_2.2.5)(64bit)
libm.so.6(GLIBC_2.29)(64bit)
libstdc++.so.6()(64bit)
libstdc++.so.6(CXXABI_1.3)(64bit)
libstdc++.so.6(CXXABI_1.3.15)(64bit)
libstdc++.so.6(CXXABI_1.3.8)(64bit)
libstdc++.so.6(CXXABI_1.3.9)(64bit)
libstdc++.so.6(GLIBCXX_3.4)(64bit)
libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
libstdc++.so.6(GLIBCXX_3.4.15)(64bit)
libstdc++.so.6(GLIBCXX_3.4.20)(64bit)
libstdc++.so.6(GLIBCXX_3.4.21)(64bit)
libstdc++.so.6(GLIBCXX_3.4.26)(64bit)
libstdc++.so.6(GLIBCXX_3.4.29)(64bit)
libstdc++.so.6(GLIBCXX_3.4.30)(64bit)
libstdc++.so.6(GLIBCXX_3.4.32)(64bit)
libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
perl(strict)
perl-interpreter
rpmlib(CompressedFileNames) <= 3.0.4-1
rpmlib(FileDigests) <= 4.6.0-1
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
rpmlib(PayloadIsZstd) <= 5.4.18-1
rtld(GNU_HASH)
ruby
samtools


Content of RPM :
/usr/bin/bam2hits
/usr/bin/ensembl_gtf_to_gff.pl
/usr/bin/extract_transcripts
/usr/bin/fastagrep.sh
/usr/bin/filterGTF.rb
/usr/bin/haploref.rb
/usr/bin/hitstools
/usr/bin/mmcollapse
/usr/bin/mmdiff
/usr/bin/mmseq
/usr/bin/mouse_strain_transcriptome.sh
/usr/bin/offsetGTF
/usr/bin/t2g_hits
/usr/bin/testregexp.rb
/usr/bin/usage.sh
/usr/lib/.build-id
/usr/lib/.build-id/33
/usr/lib/.build-id/33/cfc023fcdca99efef01fe554053651899325cc
/usr/lib/.build-id/3f
/usr/lib/.build-id/3f/b08d7096cbf1032e0b4311ba004ae7c1f241ec
/usr/lib/.build-id/50
/usr/lib/.build-id/50/a1ce6d056e12df95fa403cbb387e662d8d3f48
/usr/lib/.build-id/87
/usr/lib/.build-id/87/f38b27b884cbfda80b978427e3f433ca843c07
/usr/lib/.build-id/96
/usr/lib/.build-id/96/217cd3f081fb533b3f1849bc5653a350cbd587
/usr/lib/.build-id/cb
/usr/lib/.build-id/cb/f7a8e85d739d653993e101195309e82c67baf9
/usr/lib/.build-id/cd
/usr/lib/.build-id/cd/6f8cbc25e999e073a2701e1281dc8c7fe9afd9
There is 11 files more in these RPM.

  
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